$$\int_0^1\int_0^1\frac{\ln(2+xy)}{1+xy}dydx=\int_0^1\int_0^y\frac{\ln(2+t)}{y(1+t)}dydt$$
$$=\int_0^1\frac{\ln(2+t)}{1+t}\left(\int_t^1\frac{dy}{y}\right)dt=-\int_0^1\frac{\ln t\ln(2+t)}{1+t}dt\overset{t=\frac{1-x}{x}}{=}-\int_{1/2}^1\frac{\ln(\frac{1-x}{x})\ln(\frac{1+x}{x})}{x}dx$$
$$=\underbrace{\int_{1/2}^1\frac{\ln x\ln(1+x)}{x}dx}_{I_1}+\underbrace{\int_{1/2}^1\frac{\ln x\ln(1-x)}{x}dx}_{I_2}-\underbrace{\int_{1/2}^1\frac{\ln^2x}{x}dx}_{I_3}-\underbrace{\int_{1/2}^1\frac{\ln(1-x)\ln(1+x)}{x}dx}_{I_4}$$
By integration by parts we have
$$I_1=-\text{Li}_2(-x)\ln x|_{1/2}^1+
\int_{1/2}^1\frac{\text{Li}_2(-x)}{x}dx=\boxed{-\ln2\text{Li}_2\left(-\frac12\right)-\text{Li}_3\left(-\frac12\right)-\frac34\zeta(3)}$$
$$I_2=-\text{Li}_2(x)\ln x|_{1/2}^1+
\int_{1/2}^1\frac{\text{Li}_2(x)}{x}dx=\boxed{\frac13\ln^32+\frac18\zeta(3)}$$
$$I_3=\boxed{\frac13\ln^32}$$
For $I_4$, by using the algebraic identity
$$ab=\frac14(a+b)^2-\frac14(a-b)^2$$
we have
$$I_4=\frac14\underbrace{\int_{1/2}^1\frac{\ln^2(1-x^2)}{x}dx}_{x^2\to x}-\frac14\underbrace{\int_{1/2}^1\frac{\ln^2(\frac{1-x}{1+x})}{x}dx}_{(1-x)/(1+x)\to x}$$
$$=\frac18\int_{1/4}^1\frac{\ln^2(1-x)}{x}dx-\frac12\int_0^{1/3}\frac{\ln^2x}{1-x^2}dx$$
Since
\begin{align}
\int\frac{\ln^2(1-x)}{x}\ dx&=\ln(x)\ln^2(1-x)+2\int\frac{\ln(x)\ln(1-x)}{1-x}\ dx\nonumber\\
&=\ln(x)\ln^2(1-x)+2\left(\ln(1-x)\text{Li}_2(1-x)+\int\frac{\text{Li}_2(1-x)}{1-x}\ dx\right)\nonumber\\
&=\ln(x)\ln^2(1-x)+2\ln(1-x)\text{Li}_2(1-x)-2\text{Li}_3(1-x)+C.
\end{align}
we have
$$\int_{1/4}^1\frac{\ln^2(1-x)}{x}dx=2\ln(2)\ln^2\left(\frac34\right)-2\ln\left(\frac34\right)\text{Li}_2\left(\frac34\right)+2\text{Li}_3\left(\frac34\right)$$
and since
$$\int\frac{\ln^2x}{1-x^2}dx=\text{Li}_3(x)-\text{Li}_3(-x)-\ln x(\text{Li}_2(x)-\text{Li}_2(-x))-\frac12\ln^2x\ln\left(\frac{1-x}{1+x}\right)$$
we have
$$\int_0^{1/3}\frac{\ln^2x}{1-x^2}dx=\text{Li}_3\left(\frac13\right)-\text{Li}_3\left(-\frac13\right)+\ln3\left(\text{Li}_2\left(\frac13\right)-\text{Li}_2\left(-\frac13\right)\right)+\frac12\ln^23\ln2$$
Collect the two integrals we have
$$I_4=\boxed{\ln^32-\ln^22\ln3-\frac14\ln\left(\frac34\right)\text{Li}_2\left(\frac34\right)+\frac14\text{Li}_3\left(\frac34\right)-\frac12\text{Li}_3\left(\frac13\right)+\frac12\text{Li}_3\left(-\frac13\right)}$$
$$\boxed{-\frac12\ln3\left(\text{Li}_2\left(\frac13\right)-\text{Li}_2\left(-\frac13\right)\right)}$$
and whats left is only simplification.