One can show that $\mathbb E[|X_n - X|]$ is small by the usual analytical trick of breaking this up into two parts: one part where $|X_n - X|$ is small and one of small measure where the difference is only controlled by $Y$.
To be more precise, let's fix any $\varepsilon>0$ and define a set of bad points $B_{n,\varepsilon}=\{z:|X_n(z) - X(z)| > \varepsilon \}$ and a set of good points $G_{n,\varepsilon}$ to be its complement. Convergence in probability exactly says that
$$\lim_{n\rightarrow\infty}P(B_{n,\varepsilon}) = 0$$
for each $\varepsilon>0$. Note that we can write, using indicator functions $1_S$:
\begin{align*}\mathbb E[|X_n - X|] &= \mathbb E[1_{G_{n,\varepsilon}}\cdot |X_n - X|] + \mathbb E[1_{B_{n,\varepsilon}}\cdot |X_n - X|]\\&\leq \varepsilon + \mathbb E[1_{B_{n,\varepsilon}}\cdot |X_n - X|]\\&\leq \varepsilon + 2\mathbb E[1_{B_{n,\varepsilon}}\cdot Y].\end{align*}
where we first use that the difference of these quantities is no more than $\varepsilon$ on $G_{n,\varepsilon}$ - so the expectation is no more than $\varepsilon$ - and then that, in any case $|X_n - X|$ is no more than $2Y$ since both $X_n$ and $X$ are (almost everywhere) less than $Y$.
Then, all we need is a lemma:
Define $$M_{\varepsilon,Y}=\sup_{P(S)=\varepsilon} \mathbb E[1_S\cdot Y].$$ It is true that $\lim_{\varepsilon\rightarrow 0}M_{\varepsilon,Y}=0$ for any $Y$ with finite expectation.
Essentially, this lemma says that expectation can't concentrate too heavily on sets of low probability. We can prove this via the usual dominated convergence theorem*: If it were not true, we could produce a sequence of sets $S_1,S_2,\ldots$ such that $P(S_n)=1/2^n$ but such that $\lim_{n\rightarrow\infty}\mathbb E[1_{S_n}\cdot Y]$ was not zero - but this violates the dominated convergence theorem because the sequence $1_{S_n}\cdot Y$ converges pointwise almost everywhere to zero due to the Borel-Cantelli lemma.
This in hand, we can take our inequality one step further:
$$\mathbb E[|X_n - X|] \leq \varepsilon + 2M_{\varepsilon,Y}$$
and then take the lim sup with $n$ on both sides:
$$\limsup_{n\rightarrow\infty}\mathbb E[|X_n - X|] \leq \varepsilon$$
and since this inequality holds for all $\varepsilon>0$, we get
$$\lim_{n\rightarrow\infty}\mathbb E[|X_n - X|] = 0.$$
*Of course, this is a bit lazy - we need this lemma to prove dominated convergence too! You can get also get the lemma out of the monotone convergence theorem which pretty directly tells you that not too much of the area of an integrable function lies above a rising threshold. It's also possible to use the Radon-Nikodim theorem to show this by constructing a measure zero set on which $Y$ would have to have positive integral if the lemma failed (which is a contradiction).