There are at least two substantially different meanings to $\frac{\partial}{\partial x}f(x,\ y,\ z(x))$. The $\partial x$ could mean "with respect to $x$ the independent variable," or it could mean "with respect to the $x$ the first parameter of $f$." I think this can be understood in light of a net income calculation. Suppose $x$ is an individual's taxable gross income, $y$ is her non-taxable gross income (gifts received, etc.), $z$ is her income tax, and $f$ is her net income, all over the same year. Since net income depends on taxable gross income, non-taxable gross income, and income tax, as given by $f = x + y - z$, and income tax depends on taxable gross income, as given by $z = .15x$ (using a single 15% tax bracket for simplicity), we can write the overall equation as $f(x,\ y,\ z(x)) = x + y - z(x)$ where $z(x) = .15x$, and then consider the meaning of $\frac{\partial}{\partial x}f(x,\ y,\ z(x))$.
If we interpret $\partial x$ to mean "with respect to $x$ the independent variable," then $\frac{\partial}{\partial x}f(x,\ y,\ z(x))$ represents the change in net income relative to a reported change in taxable gross income, whereas if we interpret $\partial x$ to mean "with respect to the $x$ the first parameter of $f$," then $\frac{\partial}{\partial x}f(x,\ y,\ z(x))$ represents the change in net income relative to an unreported change in taxable gross income.
I have given, just as I have learned, a binary explanation of this difference. The $\partial x$ refers to either an independent variable or a parameter of $f$. My question is whether it is also acceptable for it to refer to something in between. Let's assign a new color to the contents of each nested layer of a function's parentheses, so that the above example becomes $f(\color{blue}{\textrm{x, y, z(}}\color{tan}{\textrm{x}}\color{blue}{\textrm{)}})$. This disambiguates things by allowing us to refer to the change in net income relative to a reported change in taxable gross income with $\frac{\partial}{\partial \color{tan}{\textrm{x}}}f(\color{blue}{\textrm{x, y, z(}}\color{tan}{\textrm{x}}\color{blue}{\textrm{)}})$ and the change in net income relative to an unreported change in taxable gross income with $\frac{\partial}{\partial \color{blue}{\textrm{x}}}f(\color{blue}{\textrm{x, y, z(}}\color{tan}{\textrm{x}}\color{blue}{\textrm{)}})$. I think colors are less misleading than subscripts in this case, because $\color{tan}{\textrm{x}}$ and $\color{blue}{\textrm{x}}$ are the same algebraic entity; it's just that when the calculus eats an algebraic expression and spits out a new one, it sometimes chews up the two $x$'s a bit differently.
With this setup, the question can be asked quite succinctly; can $\frac{\partial}{\partial x}f(x,\ y,\ z(x),\ a(x,\ z(x)), b(x,\ z(x))$ also mean $\frac{\partial}{\partial \color{orange}{\textrm{x}}}f(\color{blue}{\textrm{x, y, z(}}\color{tan}{\textrm{x}}\color{blue}{\textrm{), a(}}\color{orange}{\textrm{x, z(}}\color{tan}{\textrm{x}}\color{orange}{\textrm{)}}\color{blue}{\textrm{), b(}}\color{orange}{\textrm{x, z(}}\color{tan}{\textrm{x}}\color{orange}{\textrm{)}}\color{blue}{\textrm{)}}$ and/or $\frac{\partial}{\partial \color{lime}{\textrm{x}}}f(\color{blue}{\textrm{x, y, z(}}\color{tan}{\textrm{x}}\color{blue}{\textrm{), a(}}\color{lime}{\textrm{x, z(}}\color{tan}{\textrm{x}}\color{lime}{\textrm{)}}\color{blue}{\textrm{), b(}}\color{red}{\textrm{x, z(}}\color{tan}{\textrm{x}}\color{red}{\textrm{)}}\color{blue}{\textrm{)}}$, and/or have some other meaning drawn via a similar color hierarchy, or is a partial derivative unable to be taken with respect to orange or green (or red) $x$, since they are neither independent variables nor parameters of $f$?