The OP asks, "Given $n\gt2$ points on the plane, not all on a line, is there another point, call $X$, which its distance from all the given points is rational number?"
The answer is, sometimes yes and sometimes no.
To see that the answer is sometimes yes, consider any $n$ points on a circle of radius $1$. They are obviously all at the rational distance $1$ from the center of the circle.
To see that the answer is sometimes no, start with any two points, and draw all circles of rational radius around each point, then take the set of intersections of pairs of these circles. This set is countable, and it constitutes the set of all points where the future point $X$ must lie. Now around each of these countably many points, draw all circles of rational radius. The union of all these circles is a set of measure $0$ (because each circle is a set of measure $0$, and there are only countably many of them). So if your third point (when $n\gt2$) is not in this set of measure $0$, it is at an irrational distance from all the points which are at a rational distance from both of the first two points. Roughly speaking, if you pick your $n$ points "at random," then, with probability $1$, any three of them will fail to be simultaneously at a rational distance from any other point.