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For mhchem, I need to decide on a typographical representation of orbitals.

Wikipedia tells me, there are atomic orbitals with letters s, p, d, f and g. In a later table, there is even h. Then, there are molecular orbitals with greek letters. Orbital hybridisation uses the letters s, p and sp, sp², sp³.

The IUPAC green book on (printed) page 32 uses upright characters for 1s, 2s, 2p etc. However, in the footnotes on page 19, ‘orbitals r and s’ are in italic. (r? Wikipedia did not tell me about this.)

That is the only occurrence in an IUPAC document I could find via search. Are there more?

There are other occurences in the Blue Book in italic, but they are stereodescriptors. (1s,3s)-cyclobutane-1,3-diol.

A quick search at Google Books revealed the convention of italic font for orbitals, e.g. Organic Chemistry, 2008 or Essentials of Organic Chemistry, 2006, or Orbital Interactions in Chemistry, 2013, all published by Wiley.

However, there are also Molecular Orbitals and Organic Chemical Reactions, 2011 and Discovering Chemistry With Natural Bond Orbitals, 2012 by the same publisher that use an upright font.

Anyhow, I need to decide for one way or the other. Is there any IUPAC document, I could base my decision on? One, that defines the meaning of the letters and not just uses them.

Second question: I need to distinuish orbitals form other notations. Are my following assumptions correct to reliably detect orbital notations?

  • Orbitals are always written as number + lower-case letter
  • Letters can be s, p, d, f, g, h.
  • There is no element entity in chemical notations with these (lower-case) letters. But there is p for proton.
  • The letters for abbreviations for organic structure fragments such as ‘c’, ‘m’, ‘p’, ‘r’, ‘s’, and ‘t’ overlap, but they are never written with a number in front of them.

Disclaimer: I am not a chemist and am not familiar with the meaning of all of this. I am interested in the typography, though.

mhchem
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  • @permeakra sp, sp², sp³ can easily be recognized, as can Cs, Gd, ..., of course. I was talking about the one-letter orbitals. Where can I find an (authorative) example for $d^2$? – mhchem May 28 '16 at 15:59
  • @KennyLau Are "General orbitals" some kind of (mathematical) variable? $r \neq s$ looks like that. – mhchem May 28 '16 at 16:03
  • I would deduce so (I am not sure at all) – Kenny Lau May 28 '16 at 16:06
  • mhchem, strictly speaking orbitals are just functions of the coordinates of only one electron (spatial and eventually spin). They are used/combined in different context to get a more important function, and can be chosen with some arbitrariness. In the case of Hydrogen atom, they also can represent stationary states, and in under a particular chose they depends parametrically of 3 numbers. One of them is called s, p, d, f, g, h i, ... when its value is 0, 1, 2, 3, 4,... respectively. – user1420303 May 28 '16 at 20:37
  • They hardly can be confused with elements names, I can not imagine a context that generate this ambiguity . – user1420303 May 28 '16 at 20:40
  • Not at all. Specially in more advanced treatments.
  • If you are refering to hydrogen like orbitals, yes, they are normally used.
  • Every symbol of an element start with upper-case. Proton (in chemistry) is normally denoted by $H^+$. The characters in lower case are present in the symbols of the elements.
  • I would say yes, but I am not sure.
  • – user1420303 May 28 '16 at 20:42
  • I never experienced confusion with this while reading books, papers etc. Also, I do not remember to have detected any confusion of this kind while teaching chemistry. – user1420303 May 28 '16 at 20:53
  • @user1420303 You completely misunderstood the intention of my question. It is not about human confusion and understanding, but about a computer program detecting certain elements (not chemical elements, but semantic entities) and creating correct typography. – mhchem May 28 '16 at 21:01
  • Orbitals r and s in the book are generic names. In more theoretical treatments there are a lot of kinds of orbitals. Many times they are denoted by a greek character with a letter as subscript, like $\phi_i$. Both varies according to author choice. Subscripts are normally loosely divided with phrases like "i,j,k subscripts represent unoccupied orbitals while letter like a,b,c represent occupied ... " Sometimes it is needed to write too much symbols and the greek letter is completely avoided and the latin letters are used directly. – user1420303 May 28 '16 at 21:02
  • @mhchem, I apologize by the misunderstanding. – user1420303 May 28 '16 at 21:05
  • @mhchem I know your LaTeX package, Incidentally I was trying to get some results with it right now. What exactly are you trying to do? Or, what problem are you trying to solve? – user1420303 May 28 '16 at 21:10
  • @user1420303 Don't worry! Should we move to the Chat? http://chat.stackexchange.com/rooms/3229/the-periodic-table – mhchem May 28 '16 at 21:10